[Chimera-users] question

Elaine Meng meng at cgl.ucsf.edu
Thu Feb 25 20:15:02 PST 2010

Hi Xinlei,
It may be that you need to turn off the "cap high values at box faces"  
option, as described in this previous post:


I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Feb 25, 2010, at 2:39 PM, Huang, Xinlei wrote:

> Hi,
>    Thank you for inventing the software, it rocks!
> By the way I have a question about viewing the 3D reconstruction  
> image of a Virus like particle containing small nanoparticle cores.  
> When I tried to increase the electron density in order to see the  
> inside cores there always was a box showed up along with the  
> nanoparticle. I want to know is there a way to remove the outside  
> box? Here I attach an image to explain better what I mean. I  
> appreciate you help.

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