[Chimera-users] sausage view
meng at cgl.ucsf.edu
Tue Aug 24 09:07:38 PDT 2010
Yes, there is a "worms" representation, where the fatness of the worm can be used to show values of any numerical residue property. Some examples of residue properties: average bfactor, amino acid hydrophobicity, conservation in a sequence alignment, RMSD at that position within an NMR ensemble.
Worms can be displayed using the "Render by Attribute" tool (under Tools... Depiction in the menu).
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco
On Aug 22, 2010, at 9:32 AM, lalit.deshmukh at huskymail.uconn.edu wrote:
> Is there anyway to generate a sausage view (see the attached image) by
> using Chimera? My apologies if I missed something/or this has been
> discussed before.
> Thanks in advance,
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