goddard at cgl.ucsf.edu
Fri Nov 20 09:37:20 PST 2009
To write a list of selected atoms to a file use menu entry
Actions / Write List...
That will give atom names like "HIS 16.A ND1". If you prefer those
selected atoms written to a file in PDB format use menu
Actions / Write PDB...
-------- Original Message --------
Subject: [Chimera-users] question
From: Laura Packer
Date: 11/20/09 7:35 AM
> To whom it may concern:
> I am not sure if I am sending this inquiry to the correct e-mail
> address. If not, I apologize for any inconvenience.
> I am looking to acquire a list of atoms that are within a certain
> distance of a set other atoms. I have googled this question and have
> learned how to select these atoms: bfsdjf
> select <description of atoms/residues> z<5.0 # or zr<5.0
> select <description of atoms/residues> za<5.0
> What I would like to know is how to get a list of these results. It
> is not appearing in my reply log as I thought it might.
> Thank you for your time.
> Laura Packer
> <mailto:packer at bu.edu>
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