[Chimera-users] printing "zone" search
pavlovicz.7 at osu.edu
Fri Dec 14 16:55:39 PST 2007
Hi Eric, thanks for your help. I'm getting closer to achieving the results i'd like.
So i've been able to properly select the residues within a specified radius of my ligand, but am a little confused as to how Chimera handles the selection list. If i try:
i get a list like this:
> [<_chimera.Residue object at 0x578d2020>, <_chimera.Residue object at 0x578cbfb0>, ... ]
but if i try:
for x in chimera.selection.currentResidues():
i get output that is much closer to what i'm looking for:
What is the reason for the difference between these two forms of output that seem to be accessing the same list? Also, is there a way i can get more detailed output with residue names and numbers, such as ['#0:TYR499','#0:TRP496',...]?
Sorry if these questions are answered elsewhere, but i could not find the answers online. Is there a document out there that can teach me how to better master the Chimera Python modules for scripting? I'm no Python expert -- i've so far only been learning things as i need them. Thanks again,
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