[Chimera-users] writing translation/rotation

Thomas C. Marlovits marlovits at imp.univie.ac.at
Wed Aug 8 05:19:43 PDT 2007


am looking for an analysis tool in Chimera  that would write out -  
let's say a matrix for translation/rotation of a pdb-file in respect  
to another one.

Usage:  would like to align chain A and chain B present in a pdb-file  
and want to know which translation/rotation matrix has to be applied  
in order to convert  the non-aligned pdb-coordinates of chain B to  
the 'new" aligned pdb-coordinates.

Thanx for your help,


Thomas C. Marlovits, PhD, M.A.S.

IMP-IMBA Research Center
	- Research Institute of Molecular Pathology (IMP)
	- Institute of Molecular Biotechnology, Austrian Academy of Sciences  

Dr. Bohr-Gasse 3
Room IMBA/6.02
A-1030 Vienna
Austria, Europe

fone:	(++43-1) 79044-4630
fax:	(++43-1) 79044-4401
email:	marlovits at imp.univie.ac.at

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