Subject: Re: [nmr_sparky] how generate peak list from .str file of BMRB
From: Woonghee Lee
Date: Jun 25, 2015

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You can just type BMRB entry code in that little box beside BMRB instead
of using rl, however, a version older than BUILD 06/xx/15 may not be
working properly as BMRB changed something on their URL. However, you
can just try.

If you do rl method, you need to read sequence file in that ta
window.

Please consider watching this video:
https://www.youtube.com/watch?v=Fb3vCEsuPQw

On Thu, 2015-06-25 at 16:41 -0400, Guowei Yin puppyg.ruc@...
[nmr_sparky] wrote:

Woonghee,

Thank you. by ta, I chose type N-HSQC, then click
untage，　“simulate” , 　it shows no peaks populated. Whats wrong
with this?

By the way it looks like at the bottom of that window we can directly
read BMRB file, how this gonna work?

Thank you,
Guowei

2015-06-25 15:58 GMT-04:00 Woonghee Lee woonghee791113@...
[nmr_sparky] nmr_sparky@yahoogroups.com :

Hi Guowei,

By using two-letter-code ta in NMRFAM-Sparky, you can
simulate peaks
in the Superfast assignment dialog.
You need to detach _s (meaning the peak is simualted) by
ut (untag)
or cu (center and untag).

Best,
Woonghee

On Thu, 2015-06-25 at 15:45 -0400, Guowei Yin
puppyg.ruc@...

[nmr_sparky] wrote:

Hi all,

The new Sparky could convert .str file (NMR-STAR v3.1) to
Sparky
resonance list. I can load this list by command rl. But,
to use the
assignment downloaded from BMRB, I still need to generate a
peak list
which I could use to create peaks in Sparky. Could you
anyone tell me
how to do it? Thank you.

Best,
Guowei