On 08.02.2013, at 18:02, Martin Ballaschk ballaschk@... wrote:

Dear Sparky users,

after assigning a protein in CCPN I want to move the NH/N assignment of my root spectrum (HSQC) to Sparky. What does it need for that?

* the HSQC spectrum itself: a ucsf file – that was easy to import.
* a resonance list: Im not sure what that is for.
* a peak list?

I managed to load the spectrum and also a resonance list, but the assigned peaks did not (magically) appear in my spectrum. Can I generate peaks from the resonance list? I did not find a function to import a peak list, I guess thatd be all I need. And it would suit me better than generating peaks from the resonance list.

I generated peak lists from CCPNs format converter which have the format:

Assignment w1 w2 Height Volume
T31HN-T31N 9.879 125.768 1.70E+05 1.42E+06
.
.
.

Does that look right?

Any help (also some kind of FAQ/HOWTO) would be heavily appreciated, as Im pretty new to Sparky and dont really know where to start.

Regards,
Martin


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Martin Ballaschk
AG Schmieder
Leibniz-Institut für Molekulare Pharmakologie
Robert-Rössle-Str. 10
13125 Berlin
ballaschk@...
Tel.: +49-30-94793-234/315
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