Dear Woonghee,
thanks for the quick answer. I was hoping for a file in sparky where residue names are defined which I simple could
alter. You are right it should not be a big deal with python to split from the column “assignment”. So I will do it like you suggested.
Best regards,
David
Von: nmr_sparky@yahoogroups.com nmr_sparky@yahoogroups.com
Gesendet: Montag, 8. April 2019 14:22
An: nmr_sparky nmr_sparky@yahoogroups.com
Betreff: Re: [nmr_sparky] sparky spectrum list assigned residue names split
Dear David,
If you have multiple numerical characters in the residue name, the first one will be parsed. In your case, I would suggest saving peak lists and using spreadsheet (Excel) or writing a simple python codes.
Best,
Woonghee
On Mon, Apr 8, 2019, 07:12 Schröder, David Christopher dschroeder@... [nmr_sparky] nmr_sparky@yahoogroups.com wrote:
Dear all,
I am using sparky as a beginner to assign small modified peptides(peptide bonds replaced by triazoles). Therefor
I used our pdb nomenclature for assignments. All my residue names consist of three characters followed by the residues number.
E.g. ALA7 V4n18 L4c22. For the NOESY spectrum list I would like to have it split accordingly: 7 ALA HA; 18 V4n HB etc. However it splits prior the
first number instead of three letters. Is there a possibility to define artificial residue names?
Best regards,
David