Subject: AW: [nmr_sparky] sparky spectrum list assigned residue names split
From: Schröder, David Christopher
Date: Apr 8, 2019

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Dear Woonghee,

thanks for the quick answer. I was hoping for a file in sparky where residue names are defined which I simple could

alter. You are right it should not be a big deal with python to split from the column “assignment”. So I will do it like you suggested.

Best regards,

David

Von: nmr_sparky@yahoogroups.com nmr_sparky@yahoogroups.com
Gesendet: Montag, 8. April 2019 14:22
An: nmr_sparky nmr_sparky@yahoogroups.com
Betreff: Re: [nmr_sparky] sparky spectrum list assigned residue names split

Dear David,

If you have multiple numerical characters in the residue name, the first one will be parsed. In your case, I would suggest saving peak lists and using spreadsheet (Excel) or writing a simple python codes.

Best,

Woonghee

On Mon, Apr 8, 2019, 07:12 Schröder, David Christopher dschroeder@... [nmr_sparky] nmr_sparky@yahoogroups.com wrote:

Dear all,

I am using sparky as a beginner to assign small modified peptides(peptide bonds replaced by triazoles). Therefor

I used our pdb nomenclature for assignments. All my residue names consist of three characters followed by the residues number.

E.g. ALA7 V4n18 L4c22. For the NOESY spectrum list I would like to have it split accordingly: 7 ALA HA; 18 V4n HB etc. However it splits prior the

first number instead of three letters. Is there a possibility to define artificial residue names?

Best regards,

David