Subject: 3D HNCA --> 2D Plane with " ucsfdata " and mirroring HSQC plane alone 1H.
From: Vasantha Kumar M. V.
Date: Sep 20, 2017

Next: 1269


Dear Sparky group,

I have a 3D HNCA spectra (15N13C2H sample with deuterium decoupling) acquired on VNMRJ800.
I use the NMRpipe to convert the data into ucsf format. When I loaded ucsf file to sparky the third
dimension (Ca) looks correct, but the HSQC plane (of HNCA) shows the mirroring of the entire spectra alone
1H. I have tried to use xr xx commands to change the dimensions, found that dimensions are correct,
but all the resonances in HSQC plane flipped horizontally or 180° on 1H axis.
I dont know why.!!!

The script that I used to process HNCA works well with other HNCA spectra (15N13C sample, no deuterium).
The only difference is in this sample we have deuterium decoupling. I have also attached the image of HSQC plane
with respect to 2D HSQC.

I would highly appreciate your kind help if anyone would suggest a possible way to tackle this issue.

Thanks
Vince

PS: Is there is a way to use sparkys ucsfdata to correct the mirroring.


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