Hi,

with Peaks2sparky.awk, it does write the peak list but not the assignment. please find below a sample of converted peak list.

[bbml@localhost flya_cara3_re]$ peaks2sparky.awk flya.seq sepio-final.prot HNCA_asn.peaks
                         ?-?-?    8.300 75.582 123.295
                         ?-?-?    8.300 43.878 123.295
                         ?-?-?    8.300 43.787 123.295
                         ?-?-?    8.300 89.794 123.295
                         ?-?-?    8.300 52.374 123.295
                         ?-?-?    8.300 52.578 123.295
                         ?-?-?    8.300 19.121 123.295
                         ?-?-?    8.300 90.673 123.295
                         ?-?-?    8.300 68.635 123.295

here in place of ?-?-?, it should actually write the assignment by flya.

Thanks,

Harini.

On Wed, Dec 14, 2016 at 4:07 PM, Eiso AB eab@... [nmr_sparky] nmr_sparky@yahoogroups.com wrote:

you can try this link if you want to process the new flya .peaks format.
http://nmr2.chem.uu.nl/~eiso/ bin/peaks2sparky.awk

E

balajiharini@... [nmr_sparky] wrote:

Dear Wong,

I could successfully run the automated structure calculation using CYANA FLYA by picking peaks using sparky. Now i would like
to assign the spectrum based on the assignments made by flya. I tried using peaks2sparky.awk script, it does generate the peak
list but there is no assignment in there.
for example., if the assigned peak is
2 8.142 120.184 0 U 5.500E+00 0.000E+00 - 0 H.78 N.78 #MAP 83
then after using script, it says
- 8.142 120.184, jus the peak, without assignment.
if i load this using rp, then i can see only the peak not assignment. how to do this.

thanks,
harini.