Subject: Re: [nmr_sparky] Re: Side chain assignment and CHSQC assignment
From: Kiran Shivaiah
Date: Feb 23, 2016

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error. I have data of HCCH abd NOESY only


On Tuesday, February 23, 2016 3:20 PM, Kiran Shivaiah kiran.shivaiah@... wrote:


Hello Woonghee,

I have not only data of HCCH and NOESY , HNHA. So would you suggest me to run few C(CO)NH and H(CCO)NH or there any other manual way to achieve the same. Meanwhile can you send me (may screen shot) of how assigned HCCH and C-HSQC looks (after assignment). It would be of great use.

Regards
Kiran


On Tuesday, February 23, 2016 3:10 PM, woonghee791113@... [nmr_sparky] nmr_sparky@yahoogroups.com wrote:


Dear Kiran,

The peaks generated are not random. They are from statistics but still far from reality.
You cannot expect assignments to be predicted that accurate unfortunately.

What do you have for side chains? If you have C-HSQC, C(CO)NH, H(CCO)NH, you can run APES and submit to PINE. If you dont have C(CO)NH and H(CCO)NH, it will be too difficult for you to assign side chains.

Woonghee