Subject: use the tool "ucsfdata" to solve hcch_tocsy and C13hsqcNoesy problem
From: ethernet3399
Date: Jul 7, 2005



Hello, everybody! Today I set this group up, all the Sparky users are
welcome. I make a post about hcch_tocsy and C13hsqcNoesy two H1 axis
woudnt match.

I believe everybody who want to solve a protein structure, must
acquire these two spectrums: hcch_tocsy and C13hsqcNoesy. But maybe
the hcch_tocsy spectrums different acquire order for two H1, when I
convert these two spectrum from nmrpipe to ucsf format, the two H1
axis mismatched. Actually, for comparision between these two spectrum,
we need to make a 90 degree turn for hcch_tocsy, now the problem
comes. When I move the pointer in 90 degrees turned hcch_tocsy up, the
pointer in C13hsqcNoesy move left. Its weird.

After I know Sparky match two spectrums axis mechanism, I found I can
change these two H1 axiss name use the command ucsfdata.

This command is more usage than that. Type ucsfdata with no
parameter will show its help page.

For this problem, solve it like this:
ucsfdata -a2 H1 hcch_tocsy.ucsf
ucsfdata -a3 H2 hcch_tocsy.ucsf
ucsfdata -a2 H2 C13hsqcNoesy.ucsf
ucsfdata -a3 H1 C13hsqcNoesy.ucsf

Then use Sparky to open these specrums, make a 90 degree turn
(shortcut xx) for hcch_tocsy. Now it matched.

All the experiences or problems are welcome! May this group help!