SuperPose Version 1.0


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SuperPose Output for 2MNR and 4ENL

SuperPose used a secondary structural alignment to guide the superposition.
Local RMSD
Alpha CarbonsBack BoneHeavyAll
RMSD13.0112.9212.9812.98
Atoms343137218521852
StructureResidues
2MNR 3-14, 18-57, 58-127, 128-142, 143-158, 159-201, 202-221, 222-261, 262-297, 298-321, 325-332, 333-351
4ENL 1-12, 13-52, 64-133, 138-152, 177-192, 205-247, 270-289, 291-330, 332-367, 374-397, 398-405, 415-433
Global RMSD
Alpha CarbonsBack BoneHeavyAll
RMSD13.0112.9212.9812.98
Atoms343137218521852
StructureResidues
2MNR 3-14, 18-57, 58-127, 128-142, 143-158, 159-201, 202-221, 222-261, 262-297, 298-321, 325-332, 333-351
4ENL 1-12, 13-52, 64-133, 138-152, 177-192, 205-247, 270-289, 291-330, 332-367, 374-397, 398-405, 415-433

SuperPose Output Images

WebMol
MolScript Superposition Image
Difference Distance Matrix

SuperPose Output Text Files

Sequence Alignment
Secondary Structure Alignment
Superposition (PDB)
RMSD Report

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Problems? Questions? Suggestions? Contact Raj Maiti or David Wishart



Acknowledgements:

SuperPose uses VADAR, BioPerl, WebMol, EMBOSS, ClustalW, MolScript, ImageMagick, and Gnuplot.

SuperPose v1.0 (2004) Rajarshi Maiti, Gary Van Domselaar, Haiyan Zhang, and David Wishart

Funding for this project was provided by    and