# # commands for Chimera image tutorial: Similar Binding Sites # (additional stuff must still be done interactively) # commands are for Chimera version 1.4 or newer # windowsize 831 544 open 1exp open 1cel delete :.b preset apply int 1 ~disp color gold #0 color cyan #1 set bg_color white alias site1 #0:84,126,233,171,205 alias site2 #1:367,141,217,145,228 alias both site1 | site2 disp both match iterate 2.0 site2 site1 focus both color byhet set subdivision 10 colordef tgold 1 .843 0 .2 colordef tcyan 0 1 1 .15 color tgold,r #0 color tcyan,r #1 # the following requires a previously created ribbon style named slim ribscale slim