Files available for download:


  • gh-gepis.expression.data.txt.gz (13Mb)--EST expression data for all genes
  • gh-gepis.EST-hits-tissue.info.txt.gz (1.3Gb)--List its EST hits and the matching ESTs' tissue library information for all genes
  • gh-gepis.database.tar.gz (43Mb)--Database table dumps in text format, as well as SQL table definition files should be portable to any SQL database.
  • gh-gepis.data.tar.gz (293Mb)--Data used to derive EST-based gene expression profiling, including:
    • nci_lib.info.human nci_lib.info.mouse --List the tissue type and histology information for all EST libraries used in analysis;
    • est-lib.human est-lib.mouse --List EST and its cDNA library name pair;
    • tissue.est.counts.human.xls tissue.est.counts.mouse.xls --Summarize the total EST counts for each tissue category;
    • gh-gepis.gene.exons est.exons.human est.exons.mouse --Genomic coordinates, exon boundaries of genes and ESTs. The fields are: GeneID chr chr_start chr_end genomic-strand cDNA-direction #exons percent_coverage percent_identity exon_boundaries;
    • gh-gepis.gene.matched.ests --List genes and their matching ESTs. The fields are: GeneID chr chr_start chr_end genomic-strand cDNA-direction EST-Name chr chr_start chr_end genomic-strand cDNA-direction;